Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908724.1_cds_XP_016458902.1_52484
CDS Infomation

[gene=LOC107782535] [db_xref=GeneID:107782535] [protein=protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like] [protein_id=XP_016458902.1] [location=join(13141..15365,15476..16589)] [gbkey=CDS]
Sequence

ATGTCTTGGAAGAGCAGTAGCGGGGAACAGAATGGTGGGCGGTTGTTGCGCGACATTGAA
GAAATTAGTAAAGCCCTTTATGTACATAAAACCCCTCACAAGGCTTTAACTTTTCAAGCA
GATCATAGGCATGATTCTTTTGGTGATACCTATAGTTCTAAATCCAGTTCCGATGTTGTA
CCTGATGACATGCTGCGTAAACAGAAGAAATCATCAATGTGGAGTTGGAATCCACTAAAG
GCTCTAACTCATATCCGCCATCGACGGTTTAATTGTTGTTTCTTTCTTCATGTTCATGCC
ATTGAAGGATTGCCTGTCAATTTCAAGGACCTTGCTTTGTGTGTAAATTGGAAACGTAAG
GGTGAAGTGATGAGAACTCGCCCTGCTCAGGTTTGTCAGGGAACAGCTGAGTTTGAAGAG
ACTTTGACACATTCCTGTTCTGTATATGGAAGTAGGACAGGACACCAGCATTCAGCAAAG
TATGAGCCTAAGCATTTACTGCTTCATGTTTCTGTGATAGGGGCTCCAAGCCTTGATATT
GGCAAACATTGGGTTGATCTTACGAGGTTGCTTCCACTTACCCTGGAGGAGTTAGAGGAG
GGAAGAAGGAATTCAGGGAAGTGGACCACGAGCTTCAAGCTTTCAGGAAAGGCTAAAGGT
GCAATGCTGAATGTTAGTTTCGGGTTTTCTGTATCAGGGAGTAACTCGATTGAACCTAGT
CAGTTCGTACAAGCCATCAAATCTGCTGCAATAGATCATTCCTCAGAATGTGATGGGACT
AGTAGTAATAGAATGCTTCGGAGGGTTGGAAGTGTTCCCCACAAGCCTGCTGGTATGACT
CATTTTTCATCTAGGTCACTGGATGCTAGAAGTTTTGATGAAGTTTTATCAGACCAAAAA
TCAGAACTTTCTCGATCTATTACTTTTCTGTATAAAAAACTTGAGGAAGGAAAATTGGAG
AAATTAGATGAATTAGATTTCTTATATGAACATTTAGAACCCTTAAAACCAAACTCTGGT
GCTTTGTCTCAGCCTTATGCTGAAAGTACCAGGGATGATCAACATATTGAGTTTACTGTC
AGTGAGCTGGGCATGGAATCTTCTAGGAAAGAGCCGTTGAAACCAGAAGTATGTTCTTAT
GAAAGTTGTGATGATACTTCAATAGAAACTACTGATGTTGCTTACATTTTGGAGGATACA
AGTAATGAGAAAAGTGAATACAATCAAAAGCATGAAAGCAATGATGTCGCGGTGAAGAGC
AGCAACTATGAGGAGCCTGATGTGTGCGAGGATGGAACATTTGAAGAGCTTGAAGCGATT
TTCCTAGACCTGTTGACTGCTGAGTCTGCAGAGTTGGATTCACCAGTAGAAATCTTTGAT
TCCATTGACCAAGAAAACTACATGAATCTGAAGTCCAGCTATAAATCCAGTAGGCGGGTG
AAATCGCTTAGCCTAGATGATGTTATAGAGTCTGTGGCAAATGATTTTCTAGATATGTTG
AACATTGAGCAGACGTCAATTGACTTGAGTTTTGATAGTTGTCCGGATTCGCCAAGAGAA
TGCCTTTTGAGACAGTTCGAAAAGGAAGCCCTTTCTTCTGGAAACCCAATTTTTGGTTTT
GATGCAACAGATGATCAAGTGGAATTCAGTGGCATTGCTTCAAGTGTTCATGGAAGAGTT
GCATGTTCTGACGACTTTGATTTGTCATCGGTTATTAAGGATTTTGAGAAGGAGCACAAG
CGGGGTACCCAGTCATTGAGGAGTAAAAGGAATGCAAAAATGATAGAAAACTTGGAAACT
GAGGCTTTAATGCGAGATTGGGGTTTGAATGAGAAAGCATTCCAGAATTCACCACGCACC
AGCTCTGGTGGGTTTGGAAGTCCAATCTATCTTTCCCCTGAAAGACCATTAGAATTACCT
CCTCTTGGGGAGGGCTTAGGTTCCAAAATGTGCACGCATAATGGGGGCTTCTTATGTTCA
ATGAGTCCTCAACATTTTAGGAATGCAAGAAATGGTGCAAGGTTGACCATGCAGTTTTCC
AGTCCAGTTGTGCTCCCTGCTGCAATGGGTTGTAGTGCTATGGAAATACTCAGCTGCTGG
GCATCTGGGGGAATTTCCAAAATGTCTGTTCAAGCGGATACACTGATGCCTTTAGAAGAT
ATCACGGGGAGGAATATACAAGAAATGGCCTGGGAAGCCAGATCCAGAATTGAACCAGAT
GAGAGGTTCACTTTTTGGCATGGCTTATTTGGTATGAAGAAGGGCAGTGAAGATCTGTTT
TTAAATCGGAGTTCTGGTCATCTGAATTCAACCTCAATAATTGATGATGTAGATTTAGGT
TGTGTGTCTATGGAGGATCTAGCTCCTTTGGCAATGGATAAGATAGAACCTCTTACAGTA
GAAGGGTTAAGAATCCAGTCAAACTTGTCAGATAATGAAGCACCTTCAAGCATTAGGCCT
CAACTTAGTGAAGTTTTTGGTTCTAATATAGCTGGCGTATTACAGCATTGGAGTGGCAAA
GAAAGTGATGATGACGAGGGTGATTTAGTGGAGCTGTCTGTTTCACCAGATGAATGGTTG
AGGCTGGATGCTGGAGATTTCAGTAATAATCCTGAGATCAAAGAAAGAATCACCAAAATA
TTAGCAGCCCATCATGCTAAGTCCCTTGGTTTAGATAGTTCAGGACTGGCAACAGGTAAA
GAAAGGTCGGAATTGTTGGGTAGAGAGTGTGGTCAACTGTGTAACAACTTGACTTTAGCT
CTGAGGGTTCAACTCAGAGATCCTTTGCGTGACTATGAGATGGTCGGCATCTCCATGCTC
ATTCTGATTCAATTAGAGAGATCTTATGCTCCTGTTGAACAATATTCCTGCAGCAGAACA
TCAGAAAGAAATTCAAGCTGTGAAAATGATCCGAAGGAGCAATTTTTTCAGGAAGAAACT
ATTGCTGGAGAAAGTGAGAGAGGAATCCATAGGCAGGCTGTTTCTCAGTTTAGGATAACT
GAAATTCATGTCGCAGGTTTTAATGTTGAGCCTAATGATGAACAAGTTTGGAGCACAAAA
AGACAGCAACAAGCTGGGACGCGGTGGTTACTATCAAGTGGCATGGGGAGGACAAGCAAA
CGTCCGTTTTCCAAGTCAAATGCCATCATAAGATTGTCGCCGCAGATAAGGAGAACTATG
CGGCCTGGAGATGCTTTGTGGAGCATCTCATCGGATTTTCATATTAGAGATTCCAAATGG
AAAGAGTTGGCAACAACAAATGTCCATATACGAAATCCTGATATTATTTTTCCAACTGAA
GGTTGTCCAAACCCCAGTCATTTGGGAATCAAGTTATAA

Peptide Sequence

PEP ID

XP_016458902.1
PEP Infomation

PREDICTED: protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like [Nicotiana tabacum]
Sequence

MSWKSSSGEQNGGRLLRDIEEISKALYVHKTPHKALTFQADHRHDSFGDTYSSKSSSDVV
PDDMLRKQKKSSMWSWNPLKALTHIRHRRFNCCFFLHVHAIEGLPVNFKDLALCVNWKRK
GEVMRTRPAQVCQGTAEFEETLTHSCSVYGSRTGHQHSAKYEPKHLLLHVSVIGAPSLDI
GKHWVDLTRLLPLTLEELEEGRRNSGKWTTSFKLSGKAKGAMLNVSFGFSVSGSNSIEPS
QFVQAIKSAAIDHSSECDGTSSNRMLRRVGSVPHKPAGMTHFSSRSLDARSFDEVLSDQK
SELSRSITFLYKKLEEGKLEKLDELDFLYEHLEPLKPNSGALSQPYAESTRDDQHIEFTV
SELGMESSRKEPLKPEVCSYESCDDTSIETTDVAYILEDTSNEKSEYNQKHESNDVAVKS
SNYEEPDVCEDGTFEELEAIFLDLLTAESAELDSPVEIFDSIDQENYMNLKSSYKSSRRV
KSLSLDDVIESVANDFLDMLNIEQTSIDLSFDSCPDSPRECLLRQFEKEALSSGNPIFGF
DATDDQVEFSGIASSVHGRVACSDDFDLSSVIKDFEKEHKRGTQSLRSKRNAKMIENLET
EALMRDWGLNEKAFQNSPRTSSGGFGSPIYLSPERPLELPPLGEGLGSKMCTHNGGFLCS
MSPQHFRNARNGARLTMQFSSPVVLPAAMGCSAMEILSCWASGGISKMSVQADTLMPLED
ITGRNIQEMAWEARSRIEPDERFTFWHGLFGMKKGSEDLFLNRSSGHLNSTSIIDDVDLG
CVSMEDLAPLAMDKIEPLTVEGLRIQSNLSDNEAPSSIRPQLSEVFGSNIAGVLQHWSGK
ESDDDEGDLVELSVSPDEWLRLDAGDFSNNPEIKERITKILAAHHAKSLGLDSSGLATGK
ERSELLGRECGQLCNNLTLALRVQLRDPLRDYEMVGISMLILIQLERSYAPVEQYSCSRT
SERNSSCENDPKEQFFQEETIAGESERGIHRQAVSQFRITEIHVAGFNVEPNDEQVWSTK
RQQQAGTRWLLSSGMGRTSKRPFSKSNAIIRLSPQIRRTMRPGDALWSISSDFHIRDSKW
KELATTNVHIRNPDIIFPTEGCPNPSHLGIKL

Transcript Sequence

Gene sequence data has not been registered.